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path: root/active_correction/scatter/figures 2.py
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### import ####################################################################


import os

import numpy as np

import matplotlib
import matplotlib.pyplot as plt
matplotlib.rcParams['font.size'] = 14

import WrightTools as wt
import WrightData as wd

### define ####################################################################


cmap = wt.artists.colormaps['default']

directory = os.path.dirname(__file__)


### scatter interference in TrEE ###########################################################


if True:    
    import NISE
    import NISE.lib.measure as m
    import NISE.experiments.trive as trive
    H0 = NISE.hamiltonians.H0
    reload(trive)
    reload(m)
    
    delay_points = np.linspace(-400, 400, 201)
    
    if False:
        # simulate
        for delay_state in [False, True]:
            trive.exp.set_coord(trive.ss, 100.)
            if delay_state:
                print 'DELAY STATE'
                trive.d2 = trive.S.Axis(1, 'd', name=r'$\mathsf{\tau_{old}}$',
                                        units = 'fs',
                                        pulse_class_name='Gauss_rwa')    
            d2 = trive.d2
            d1 = trive.d1
            d2.points = delay_points
            d1.points = delay_points
            H = H0.Omega()
            H.TOs = [1, 2, 3, 4, 5, 6]
            NISE.lib.scan.default_path = directory
            #trive.exp.timestep = 80.
            trive.exp.early_buffer = 1000.
            trive.exp.late_buffer = 1000.
            scan = trive.exp.scan(d1, d2, H=H)
            print scan.timestep
            scan.run(autosave=True, mp=False)
            
    simulation_ps = {'old': os.path.join(directory, '2016.05.02 17-48-41 old delay space'),
                     'new': os.path.join(directory, '2016.05.02 16-33-15 current delay space')}
    
    def measure_and_plot(ax0, ax1, key, scatter):
        # get simulation path
        simulation_path = simulation_ps[key]
        # measure
        scan = trive.S.Scan._import(simulation_path)
        sig1 = m.Measure(scan, m.Scatter, m.Mono, m.SLD)
        m.Mono.slitwidth = 120.
        m.Scatter.pulse = scatter  # pulse contributions are SCALED by this list: [1, -2, 2']
        m.Scatter.chop = False
        m.Scatter.ratio = 0.05
        sig1.run(save=False)
        m.Scatter.chop = True
        sig2 = m.Measure(scan, m.Scatter, m.Mono, m.SLD)
        sig2.run(save=False)
        sig1.pol -= sig2.pol
        data = wt.data.from_NISE(sig1, flip_delays=False)
        if key == 'old':
            data.transpose()
        if key == 'new':
            data.transpose()
            data.axes[0].points *= -1
        # plot
        xi = data.axes[1].points
        yi = data.axes[0].points
        zi = data.channels[0].values
        zi /= zi.max()
        levels = np.linspace(0, 1, 200)
        X, Y, Z = wt.artists.pcolor_helper(xi, yi, zi)
        ax0.pcolor(X, Y, Z, vmin=0, vmax=1, cmap=cmap)
        ax0.set_xlim(xi.min(), xi.max())
        ax0.set_ylim(yi.min(), yi.max())
        ax0.grid()
        wt.artists.diagonal_line(xi, yi, ax=ax0, ls='-')
        ax0.axhline(0, c='k')
        ax0.axvline(0, c='k')
        plt.setp(ax0.get_xticklabels(), visible=False)
        plt.setp(ax0.get_yticklabels(), visible=False)
        if key == 'old':
            ax0.set_xlabel(r'$\mathsf{\tau_{2^\prime1}}$', fontsize=18)
        if key == 'new':
            ax0.set_xlabel(r'$\mathsf{\tau_{22^\prime}}$', fontsize=18)
       # fft
        zi = data.channels[0].values
        fzi = np.fft.fft2(zi)
        fzi = np.fft.fftshift(fzi)
        step = data.axes[0].min_max_step()[2]
        freqs = np.fft.fftfreq(data.axes[0].points.size, step)
        freqs = np.fft.fftshift(freqs)
        # plot fft
        fzi /= fzi.max()
        fzi = np.abs(fzi)
        X, Y, Z = wt.artists.pcolor_helper(freqs, freqs, fzi)
        ax1.pcolor(X, Y, Z, vmin=0, vmax=0.1, cmap=cmap)
        ax1.set_xlim(freqs.min(), freqs.max())
        ax1.set_ylim(freqs.min(), freqs.max())
        ax1.grid()
        plt.setp(ax1.get_xticklabels(), visible=False)
        plt.setp(ax1.get_yticklabels(), visible=False)
        if key == 'old':
            ax1.set_xlabel(r'$\mathsf{f_{2^\prime1}}$', fontsize=18)
        if key == 'new':
            ax1.set_xlabel(r'$\mathsf{f_{22^\prime}}$', fontsize=18)
   
    if True:
        # measure, make figures
        # OLD -----------------------------------------------------------------
        fig, gs = wt.artists.create_figure(width='double', nrows=2,
                                           cols=[1, 1, 1, 'cbar'], hspace=0.5)
        # old w1
        ax0 = plt.subplot(gs[0, 0])
        ax0.set_ylabel(r'$\mathsf{\tau_{21}}$', fontsize=18)
        ax1 = plt.subplot(gs[1, 0])
        ax1.set_ylabel(r'$\mathsf{f_{21}}$', fontsize=18)
        measure_and_plot(ax0, ax1, 'old', [1, 0, 0])
        ax0.set_title(r'$\mathsf{1}$', fontsize=20, y=1.04)
        # old w-2
        ax0 = plt.subplot(gs[0, 1])
        ax1 = plt.subplot(gs[1, 1])
        measure_and_plot(ax0, ax1, 'old', [0, 1, 0])
        ax0.set_title(r'$\mathsf{-2}$', fontsize=20, y=1.04)
        # old w2'       
        ax0 = plt.subplot(gs[0, 2])
        ax1 = plt.subplot(gs[1, 2])
        measure_and_plot(ax0, ax1, 'old', [0, 0, 1])
        ax0.set_title(r'$\mathsf{2^\prime}$', fontsize=20, y=1.04)
        # colorbar
        cax = plt.subplot(gs[:, -1])
        ticks = np.linspace(0, 1, 11)
        matplotlib.colorbar.ColorbarBase(cax, cmap=cmap, ticks=ticks)
        cax.set_ylabel('intensity', fontsize=18)
        # finish
        plt.savefig('scatter interference in TrEE old.png', dpi=300, transparent=True, pad_inches=1)
        plt.close(fig)
        # NEW -----------------------------------------------------------------
        fig, gs = wt.artists.create_figure(width='double', nrows=2,
                                           cols=[1, 1, 1, 'cbar'], hspace=0.5)        
        # new w1
        ax0 = plt.subplot(gs[0, 0])
        ax0.set_ylabel(r'$\mathsf{\tau_{21}}$', fontsize=18)
        ax1 = plt.subplot(gs[1, 0])
        ax1.set_ylabel(r'$\mathsf{f_{21}}$', fontsize=18)
        measure_and_plot(ax0, ax1, 'new', [1, 0, 0])
        ax0.set_title(r'$\mathsf{1}$', fontsize=20, y=1.04)
        # new w-2
        ax0 = plt.subplot(gs[0, 1])
        ax1 = plt.subplot(gs[1, 1])
        measure_and_plot(ax0, ax1, 'new', [0, 1, 0])
        ax0.set_title(r'$\mathsf{-2}$', fontsize=20, y=1.04)
        # new w2'
        ax0 = plt.subplot(gs[0, 2])
        ax1 = plt.subplot(gs[1, 2])
        measure_and_plot(ax0, ax1, 'new', [0, 0, 1])
        ax0.set_title(r'$\mathsf{2^\prime}$', fontsize=20, y=1.04)
        # colorbar
        cax = plt.subplot(gs[:, -1])
        ticks = np.linspace(0, 1, 11)
        matplotlib.colorbar.ColorbarBase(cax, cmap=cmap, ticks=ticks)
        cax.set_ylabel('intensity', fontsize=18)
        # finish
        plt.savefig('scatter interference in TrEE current.png', dpi=300, transparent=True, pad_inches=1)
        plt.close(fig)