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diff --git a/presentation.tex b/presentation.tex
index 47ae640..874fdea 100644
--- a/presentation.tex
+++ b/presentation.tex
@@ -1,6 +1,6 @@
\documentclass{presentation}
-\title{Development of \\ Frequency Domain Multidimensional Spectroscopy}
+\title{Development of \\ Frequency-Domain Multidimensional Spectroscopy}
\subtitle{---Beyond Two Dimensions---}
\author{Blaise Thompson}
@@ -10,22 +10,27 @@
\begin{document}
\maketitle
-\begin{frame}{Brown et al. (1999)}
+\begin{frame}{Introduction to CMDS}
\begin{columns}
- \begin{column}{0.5\textwidth}
- \fbox{\adjincludegraphics[width=\textwidth]{"literature/BrownEmilyJ1999a"}}
+ \begin{column}{0.6\textwidth}
+ \includegraphics[width=\textwidth]{presentation/SK_PhDThesis_fsTable-Overview}
\end{column}
- \begin{column}{0.5\textwidth}
+ \begin{column}{0.4\textwidth}
\includegraphics[width=\textwidth]{"literature/BrownEmilyJ1999a_1"}
\centering
\\
\vspace{2\baselineskip}
$\vec{k_{\text{sig}}} = \vec{k_a} - \vec{k_b} + \vec{k_c}$
+ \vspace{2\baselineskip} \\
+ \tiny \raggedright
+ Figure: \\
+ Brown, E., Zhang, Q. and Dantus, M. (1999). \\
+ The Journal of Chemical Physics, 110(12), pp.5772-5788.
\end{column}
\end{columns}
\end{frame}
-\begin{frame}{Overview}
+\begin{frame}{Introduction to CMDS}
\adjincludegraphics[width=\textwidth]{"mixed_domain/simulation overview"}
\end{frame}
@@ -88,15 +93,28 @@
\end{columns}
\end{frame}
-\begin{frame}{Postage stamp}
- [FIGURE FROM LIT]
-\end{frame}
-
-\begin{frame}{Czech}
- [FIGURE FROM CZECH]
+\begin{frame}{Two strategies for CMDS}
+ \begin{columns}
+ \begin{column}{0.5\textwidth}
+ Time Domain
+ \includegraphics[width=\textwidth]{"literature/SinghAkshay2014a_2"}
+ \tiny
+ Figure: \\
+ Singh, A., Moody, G., Wu, S., Wu, Y., Ghimire, N., Yan, J., Mandrus, D., Xu, X. and Li, X.
+ (2014).
+ Coherent Electronic Coupling in Atomically Thin MoSe$_2$. Physical Review Letters, 112(21).
+ \end{column}
+ \begin{column}{0.5\textwidth}
+ Frequency Domain
+ \adjincludegraphics[width=\textwidth]{presentation/singh_czech}
+ More \hl{bandwidth}.
+ Crucial for electronic states, band structure.
+ \end{column}
+ \end{columns}
\end{frame}
\begin{frame}{Bandwidth}
+ A lot more bandwidth... through the usage of OPAs
\adjincludegraphics[width=\textwidth]{opa/OPA_ranges}
\end{frame}
@@ -105,24 +123,6 @@
Two ``stages'', each with two motorized optics.
\end{frame}
-\begin{frame}{Tuning}
- % TODO: curve plot?
- Tuning curves---recorded correspondence between motor positions and output color.
- \vspace{\baselineskip} \\
- Exquisite sensitivity to alignment and lab conditions---tuning required roughly once a week.
- \vspace{\baselineskip} \\
- Manual tuning is difficult...
- \begin{itemize}
- \item high dimensional motor space
- \item difficult to asses overall quality
- \item several hours of work per OPA (sometimes, an entire day for one OPA)
- \end{itemize}
-\end{frame}
-
-\begin{frame}{Preamp}
- \includegraphics[width=\textwidth]{opa/preamp}
-\end{frame}
-
\begin{frame}{Automation}
\begin{columns}
\begin{column}{0.5\textwidth}
@@ -178,24 +178,33 @@
\end{itemize}
\end{frame}
-\begin{frame}{Extensibility}
-\end{frame}
-
-\subsection{Hardware} % --------------------------------------------------------------------------
-
-\begin{frame}{Modular Hardware Model}
- [DARIEN ADDED AEROTECH IN ONE DAY]
- [I ADDED NEW OPA IN TWO DAYS]
-\end{frame}
-
-\subsection{Acquisitions} % ----------------------------------------------------------------------
+\subsection{Extensibility} % ---------------------------------------------------------------------
-\begin{frame}{Acquisition Modules}
- [SUNDEN ADDED POYNTING TUNE IN SEVERAL DAYS]
+\begin{frame}{Extensibility}
+ \begin{columns}
+ \begin{column}{0.25\textwidth}
+ \adjincludegraphics[width=\textwidth]{presentation/hardware}
+ \end{column}
+ \begin{column}{0.75\textwidth}
+ A modular hardware system that can be easily added to
+ \begin{itemize}
+ \item When a new OPA was installed on the picosecond system, PyCMDS was back in action the
+ next day.
+ \item Darien inherited a new delay stage from the Crim Group, and added it to PyCMDS in
+ less than two days.
+ \item New \emph{kinds} of hardware also possible to add, although this is more difficult.
+ \end{itemize}
+ just need to copy a script and modify...
+ % PoyntinTune
+ \vfill
+ \end{column}
+ \end{columns}
\end{frame}
-
+
\subsection{Queue} % -----------------------------------------------------------------------------
+% TODO: consider cropping, making into one slide
+
\begin{frame}{Queue}
\adjincludegraphics[width=\textwidth]{acquisition/screenshots/004}
\end{frame}
@@ -243,6 +252,19 @@
% mention: including expressions
\end{frame}
+\begin{frame}{Universal format}
+ WrightTools defines a \emph{universal file format} for CMDS.
+ \begin{itemize}
+ \item store multiple multidimensional arrays
+ \item metadata
+ \end{itemize}
+ Import data from a variety of sources.
+ \begin{itemize}
+ \item previous Wright Group acquisition software
+ \item commercial instruments (JASCO, Shimadzu, Ocean Optics)
+ \end{itemize}
+\end{frame}
+
\section{Conclusion} % ===========================================================================
\begin{frame}{Conclusion}
@@ -255,6 +277,7 @@
Wright Group
\begin{itemize}
\item Kyle Sunden
+ \item Natalia Spitha
\item Darien Morrow
\item Jonathan Handali
\item Nathan Neff-Mallon
@@ -290,7 +313,25 @@
\end{frame}
\section{Supplement} % ===========================================================================
-
+
+\begin{frame}{Tuning}
+ % TODO: curve plot?
+ Tuning curves---recorded correspondence between motor positions and output color.
+ \vspace{\baselineskip} \\
+ Exquisite sensitivity to alignment and lab conditions---tuning required roughly once a week.
+ \vspace{\baselineskip} \\
+ Manual tuning is difficult...
+ \begin{itemize}
+ \item high dimensional motor space
+ \item difficult to asses overall quality
+ \item several hours of work per OPA (sometimes, an entire day for one OPA)
+ \end{itemize}
+\end{frame}
+
+\begin{frame}{Preamp}
+ \includegraphics[width=\textwidth]{opa/preamp}
+\end{frame}
+
\begin{frame}{Modular hardware model}
\adjincludegraphics[scale=0.25]{acquisition/hardware_inheritance}
\end{frame}
@@ -303,19 +344,6 @@
Sensors with size contribute new variables (dimensions).
\end{frame}
-\begin{frame}{Universal format}
- WrightTools defines a \emph{universal file format} for CMDS.
- \begin{itemize}
- \item store multiple multidimensional arrays
- \item metadata
- \end{itemize}
- Import data from a variety of sources.
- \begin{itemize}
- \item previous Wright Group acquisition software
- \item commercial instruments (JASCO, Shimadzu, Ocean Optics)
- \end{itemize}
-\end{frame}
-
\begin{frame}{Domains of CMDS}
CMDS can be collected in two domains:
\begin{itemize}