2018-04-12 21:00

1 files changed, 0 insertions, 75 deletions

diff --git a/PbSe_global_analysis/run.sh b/PbSe_global_analysis/run.sh
deleted file mode 100755
index a38e6ff..0000000
--- a/PbSe_global_analysis/run.sh
+++ /dev/null
@@ -1,75 +0,0 @@
-set -e  # force exit upon error
-
-function printColor {
-  YELLOW='\033[0;33m'
-  NC='\033[0m' # No Color
-  printf "${YELLOW}$*${NC}\n"
-}
-
-function printLine {
-  printColor "%`tput cols`s"|tr ' ' '#'
-}
-
-function printThenPython {
-  printColor "python $*"
-  python "$*"
-}
-
-if [[ $# -eq 0 ]] ; then
-    echo 'please provide an argument in [data, simulations, figures, documents, all]'
-    exit 1
-fi
-
-# process data
-if [[ "$1" = "all" ]] || [[ "$1" = "data" ]] ; then
-  printLine
-  printColor data
-  printThenPython "data/TA A.py"
-  printThenPython "data/TA B.py"
-  printThenPython "data/TG A.py"
-  printThenPython "data/TG B.py"  
-fi
-
-# run simulations
-if [[ "$1" = "all" ]] || [[ "$1" = "simulations" ]] ; then
-  printLine
-  printColor simulations
-  #printThenPython "simulations/fit fsb19.py"
-  #printThenPython "simulations/fit fsb25.py"
-fi
-
-# make figures
-if [[ "$1" = "all" ]] || [[ "$1" = "figures" ]] ; then
-  printLine
-  printColor figures
-  printThenPython "figures/absorbance.py"
-  printThenPython "figures/kramers_kronig.py"
-  printThenPython "figures/m_factors.py"
-  #printThenPython "figures/movies_fitted.py"
-  printThenPython "figures/movies_combined.py"
-  printThenPython "figures/power_factors.py"
-  #printThenPython "figures/driven_initial.py"
-  printThenPython "figures/TA_artifacts.py"
-  printThenPython "figures/TG_artifacts.py"
-  printThenPython "figures/ta_vs_tg.py"
-fi
-
-# render documents
-if [[ "$1" = "all" ]] || [[ "$1" = "documents" ]] ; then
-  printLine
-  printColor documents
-  # main
-  printColor main
-  pdflatex --interaction=nonstopmode main
-  bibtex main
-  pdflatex --interaction=nonstopmode main
-  pdflatex --interaction=nonstopmode main
-  # SI
-  printColor SI
-  pdflatex --interaction=nonstopmode SI
-  biber SI
-  pdflatex --interaction=nonstopmode SI
-  pdflatex --interaction=nonstopmode SI
-fi
-
-printColor finished