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authorBlaise Thompson <blaise@untzag.com>2018-03-02 15:07:37 -0600
committerBlaise Thompson <blaise@untzag.com>2018-03-02 15:07:37 -0600
commit767655a9b93bcf48404efac27f2846de72965a12 (patch)
tree3bd79355c11e5d85f9148b9133a369544997e631
parente7377c286a8ed93471ff3761f30580984433c316 (diff)
2018-03-02 15:07
-rw-r--r--dissertation.cls20
-rw-r--r--dissertation.pdfbin34273364 -> 99920 bytes
-rw-r--r--dissertation.syg3
-rw-r--r--dissertation.tex34
-rw-r--r--procedures/chapter.tex83
-rw-r--r--software/chapter.tex19
6 files changed, 131 insertions, 28 deletions
diff --git a/dissertation.cls b/dissertation.cls
index ad59dae..43f1677 100644
--- a/dissertation.cls
+++ b/dissertation.cls
@@ -31,7 +31,6 @@
\RequirePackage[utf8]{inputenc}
\setlength\parindent{0pt}
\setlength{\parskip}{1em}
-\RequirePackage{enumitem}
\setlist{noitemsep, topsep=0pt, parsep=0pt, partopsep=0pt}
\renewcommand{\familydefault}{\sfdefault}
@@ -39,6 +38,25 @@
\RequirePackage{etoolbox}
\AtBeginEnvironment{verse}{\singlespacing}
+\RequirePackage[shortlabels]{enumitem}
+\newenvironment{denumerate}
+ {
+ \begin{enumerate}[topsep=0pt, itemsep=-1ex, partopsep=-10ex, parsep=1ex]
+ \singlespacing
+ }
+ {
+ \end{enumerate}
+ }
+
+\newenvironment{ditemize}
+ {
+ \begin{enumerate}[label=$\rightarrow$]
+ \singlespacing
+ }
+ {
+ \end{enumerate}
+ }
+
% --- code environment ----------------------------------------------------------------------------
% \RequirePackage{minted}
diff --git a/dissertation.pdf b/dissertation.pdf
index 3c85835..e9df137 100644
--- a/dissertation.pdf
+++ b/dissertation.pdf
Binary files differ
diff --git a/dissertation.syg b/dissertation.syg
index a878406..e69de29 100644
--- a/dissertation.syg
+++ b/dissertation.syg
@@ -1,3 +0,0 @@
-\glossaryentry{\ensuremath {N}?\glossentry{N}|setentrycounter[]{page}\glsnumberformat}{8}
-\glossaryentry{\ensuremath {N}?\glossentry{N}|setentrycounter[]{page}\glsnumberformat}{8}
-\glossaryentry{\ensuremath {\omega }?\glossentry{omega}|setentrycounter[]{page}\glsnumberformat}{36}
diff --git a/dissertation.tex b/dissertation.tex
index dae87b2..215b039 100644
--- a/dissertation.tex
+++ b/dissertation.tex
@@ -89,39 +89,39 @@ This dissertation is approved by the following members of the Final Oral Committ
% chapters ----------------------------------------------------------------------------------------
-\include{introduction/chapter}
+%\include{introduction/chapter}
\part{Background}
-\include{spectroscopy/chapter}
-\include{materials/chapter}
+%\include{spectroscopy/chapter}
+%\include{materials/chapter}
\include{software/chapter}
\part{Development}
-\include{processing/chapter}
-\include{acquisition/chapter}
-\include{active_correction/chapter}
-\include{opa/chapter}
-\include{mixed_domain/chapter}
+%\include{processing/chapter}
+%\include{acquisition/chapter}
+%\include{active_correction/chapter}
+%\include{opa/chapter}
+%\include{mixed_domain/chapter}
\part{Applications}
-\include{PbSe/chapter}
-\include{MX2/chapter}
+%\include{PbSe/chapter}
+%\include{MX2/chapter}
% TODO: perovskites
-\include{PEDOT:PSS/chapter}
-\include{pyrite/chapter}
-\include{BiVO4/chapter}
+%\include{PEDOT:PSS/chapter}
+%\include{pyrite/chapter}
+%\include{BiVO4/chapter}
% TODO: SPV
% appendix -----------------------------------------------------------------------------------------
\part{Appendix}
\begin{appendix}
-\include{public/chapter}
+%\include{public/chapter}
\include{procedures/chapter}
-\include{hardware/chapter}
+%\include{hardware/chapter}
% TODO: consider inserting WrightTools documentation as PDF
-\include{errata/chapter}
-\include{colophon/chapter}
+%\include{errata/chapter}
+%\include{colophon/chapter}
\end{appendix}
% post --------------------------------------------------------------------------------------------
diff --git a/procedures/chapter.tex b/procedures/chapter.tex
index 4ac67ed..9c9bd32 100644
--- a/procedures/chapter.tex
+++ b/procedures/chapter.tex
@@ -1,5 +1,88 @@
\chapter{Procedures}
+\section{Calibrating the 407A}
+
+Calibrating the 407A
+
+You may sometimes notice that the zero position changes dramatically from sensitivity to
+sensitivity with the 407A. If this happens, iterate through the following until zero stays
+consistent:
+
+Use the fine adjust (knob on side) to zero the 407A on the highest sensitivity
+
+Use the front adjust (flathead screwdriver needed) to zero on the lowest sensitivity
+
+\clearpage
+\section{Lytron Kodiak RC006}
+
+We have one Lytron Kodiak RC006:
+Model Number RC006G03BB1C002
+Serial Number 739383-02
+
+Regular Chiller Maintenance:
+\begin{denumerate}
+ \item Gather supplies.
+ \begin{enumerate}
+ \item 1 gallon distilled water (do not use deionized)
+ \item 1 gallon Nalco 460-PCCL104 (the pink stuff)
+ \end{enumerate}
+ \item Drain system completely.
+ \begin{enumerate}
+ \item Turn off chiller.
+ \item Break tubing at push-to-connect, plugging return.
+ \item Allow chiller to run until liquid stops flowing. You will get a pressure error, ignore
+ (silence) it.
+ \item Use tube to mouth-syphon remaining liquid from within chiller
+ \item Reconnect at push-to-connect
+ \end{enumerate}
+ \item Fill chiller with distilled water (should require <1 gallon), let run for 30 minutes.
+ \item Drain system again.
+ \item Replace filter.
+ \item Fill system with one gallon Nalco 460-PCCL104 (the pink stuff).
+ \item Turn chiller on, top-off with distilled water.
+ \item Record maintenance, order new supplies for next time if necessary.
+\end{denumerate}
+
+In the past we have had trouble with low flow errors upon system startup. %
+These seem to have been fixed by adding a “high” flow loop connecting the outlet and inlet of the
+chiller. %
+Ideally the pressure drop across this loop is sufficient to still drive fluid through the laser. %
+
+% TODO: figure
+
+\clearpage
+\section{PolyScience 6000 Series}
+
+We own two PolyScience chillers---different models but functionally equivalent.
+
+Grey: Serial Number 3E1161245
+
+White and Blue: Serial Number 4K1050550
+
+Regular Chiller Maintenance:
+\begin{enumerate}
+ \item Gather supplies
+\end{enumerate}
+
+maintenance directions
+Gather supplies
+Filter - sold in the stockroom
+1 gallon of Nalco 460-PCCL104 (the pink stuff)
+Drain system completely
+Disconnect red water line and allow chiller to pump water out.
+Push nipple of male end with flat object so check valve is released
+Take off of filter
+Push down to allow water out
+Check filters
+If air filter dirty, wash with water (let dry after washing)
+If water filter is dirty, replace
+Reassemble, fill with Nalco 460-PCCL104 (the pink stuff)
+Turn chiller on and top-off.
+
+\section{NesLab Merlin M33}
+
+
+
\section{Aligining TOPAS-C}
\section{Aligning Spitfire PRO}
diff --git a/software/chapter.tex b/software/chapter.tex
index 7ad483a..f8ceff7 100644
--- a/software/chapter.tex
+++ b/software/chapter.tex
@@ -10,13 +10,18 @@
Cutting-edge science increasingly relies on custom software. In their 2008 survey,
\textcite{HannayJoErskine2009a} demonstrated just how important software is to the modern
scientist. %
-\begin{enumerate}[topsep=-1.5ex, itemsep=0ex, partopsep=0ex, parsep=0ex, label=$\rightarrow$]
- \item 84.3\% of surveyed scientists state that developing scientific software is important or very important for their own research.
- \item 91.2\% of surveyed scientists state that using scientific software is important or very important for their own research.
- \item On average, scientists spend approximately 40\% of their work time using scientific software.
- \item On average, scientists spend approximately 30\% of their work time developing scientific software.
-\end{enumerate}
-Despite the importance of software to science and scientists, most scientists are not familiar with basic software engineering concepts.
+\begin{ditemize}
+ \item 84.3\% of surveyed scientists state that developing scientific software is important or
+ very important for their own research.
+ \item 91.2\% of surveyed scientists state that using scientific software is important or very
+ important for their own research.
+ \item On average, scientists spend approximately 40\% of their work time using scientific
+ software.
+ \item On average, scientists spend approximately 30\% of their work time developing scientific
+ software.
+\end{ditemize}
+Despite the importance of software to science and scientists, most scientists are not familiar with
+basic software engineering concepts. %
% TODO: demonstrate that `most scientists are not familiar with basic software engineering concepts'
This is in part due to the their general lack of formal training in programming and software development. \textcite{HannayJoErskine2009a} found that over 90\% of scientists learn software development through `informal self study'. Indeed, I myself have never been formally trained in software development.