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authorBlaise Thompson <blaise@untzag.com>2020-04-12 12:27:29 -0500
committerBlaise Thompson <blaise@untzag.com>2020-04-12 12:27:29 -0500
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data processing
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+title: data processing
+date: 2020-04-12
+
+This post is a roundup of open source scientific data processing projects that I know of.
+I've organized them alphabetically.
+I have some minimal notes on a few projects here, but mostly this is just a "roundup" page.
+Obviously this only scratches the surface, but I've tried to put in just the ones that I can imagine caring about.
+
+# table of contents
+
+[TOC]
+
+# Skultrafast
+
+[source](https://github.com/Tillsten/skultrafast)
+
+Skultrafast stands for scikit.ultrafast and is an python package which aims to include everything needed to analyze data from time-resolved spectroscopy experiments in the femtosecond domain. \ No newline at end of file
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title: instrumental-software
date: 2020-04-12
+This post is a roundup of open source instrumental software projects that I know of.
+I've organized them alphabetically.
+I have some minimal notes on a few projects here, but mostly this is just a "roundup" page.
+
# table of contents
[TOC]
+# EPICS
+
+# Exopy
+
+[website](http://exopy.readthedocs.io/)
+
+[source](https://github.com/Exopy/exopy)
+
+Quote:
+Exopy is a versatile data acquisition software.
+It provides an extensible set of tools to describe an perform data acquisition.
+Each measurement is described by a hierarchical structure, allowing simple nested loops structure and more complex ones involving multiple non nested loops and conditions.
+The hierarchy is edited through a Graphical User Interface, allowing a smooth learning curve.
+
# bluesky
-[bluesky](https://blueskyproject.io/) \ No newline at end of file
+[bluesky](https://blueskyproject.io/)
+
+Bluesky is a project made up of several other projects
+
+## ophyd
+
+## bluesky-ui
+
+# Instrbuilder
+
+integrates with ophyd / bluesky project.
+
+# Instrumental
+
+[website](https://instrumental-lib.readthedocs.io/)
+
+Quote:
+Instrumental is a Python-based library for controlling lab hardware like cameras, DAQs, oscilloscopes, spectrometers, and more. It has high-level drivers for instruments from NI, Tektronix, Thorlabs, PCO, Photometrics, Burleigh, and others.
+
+# Lantz
+
+[website](https://lantz.readthedocs.io/)
+
+Simple yet powerful instrumentation in Python
+
+# PyCMDS
+
+(personal project)
+
+# PyDM
+
+[project webpage](http://slaclab.github.io/pydm/)
+
+Python display manager.
+PyDM is a PyQt-based framework for building user interfaces for control systems.
+The goal is to provide a no-code, drag-and-drop system to make simple screens, as well as a straightforward python framework to build complex applications.
+
+# python-microscopy
+
+[website](http://www.python-microscopy.org/)
+
+Quote:
+python-microscopy is a large package including a farily mature microscope control GUI as well as a lot of functionality for analysis and postprocessing of microscopy data, especially for single molecule localization experiments.
+
+# Qudi
+
+[website](https://ulm-iqo.github.io/qudi-generated-docs/html-docs/index.html)
+
+??
+
+# ScopeFoundry
+
+[website](http://www.scopefoundry.org/)
+
+Quote:
+A Python platform for controlling custom laboratory experiments and visualizing scientific data.
+
+# storm-control
+
+[source](https://github.com/ZhuangLab/storm-control)
+
+Quote:
+storm-control was originally designed for acquiring single molecule localization microscopy data in a manual or semi-automated fashion.
+At a later point the ability to collect MERFISH data was added.
+
+# yaq
+
+(personal project)