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author | Blaise Thompson <blaise@untzag.com> | 2020-04-12 12:27:29 -0500 |
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committer | Blaise Thompson <blaise@untzag.com> | 2020-04-12 12:27:29 -0500 |
commit | e7b5549f5ff826735020d6c22230c42675d53f08 (patch) | |
tree | 8dbe0ca4b1b3fa832107f7e4d54633a20630f9bc | |
parent | 98a1d37e426ae341e1896a56dd824b26de85d3b1 (diff) |
data processing
-rw-r--r-- | posts/data-processing.md | 17 | ||||
-rw-r--r-- | posts/instrumental-software.md | 87 |
2 files changed, 103 insertions, 1 deletions
diff --git a/posts/data-processing.md b/posts/data-processing.md new file mode 100644 index 0000000..9d04a14 --- /dev/null +++ b/posts/data-processing.md @@ -0,0 +1,17 @@ +title: data processing +date: 2020-04-12 + +This post is a roundup of open source scientific data processing projects that I know of. +I've organized them alphabetically. +I have some minimal notes on a few projects here, but mostly this is just a "roundup" page. +Obviously this only scratches the surface, but I've tried to put in just the ones that I can imagine caring about. + +# table of contents + +[TOC] + +# Skultrafast + +[source](https://github.com/Tillsten/skultrafast) + +Skultrafast stands for scikit.ultrafast and is an python package which aims to include everything needed to analyze data from time-resolved spectroscopy experiments in the femtosecond domain.
\ No newline at end of file diff --git a/posts/instrumental-software.md b/posts/instrumental-software.md index 70767f2..610d815 100644 --- a/posts/instrumental-software.md +++ b/posts/instrumental-software.md @@ -1,10 +1,95 @@ title: instrumental-software date: 2020-04-12 +This post is a roundup of open source instrumental software projects that I know of. +I've organized them alphabetically. +I have some minimal notes on a few projects here, but mostly this is just a "roundup" page. + # table of contents [TOC] +# EPICS + +# Exopy + +[website](http://exopy.readthedocs.io/) + +[source](https://github.com/Exopy/exopy) + +Quote: +Exopy is a versatile data acquisition software. +It provides an extensible set of tools to describe an perform data acquisition. +Each measurement is described by a hierarchical structure, allowing simple nested loops structure and more complex ones involving multiple non nested loops and conditions. +The hierarchy is edited through a Graphical User Interface, allowing a smooth learning curve. + # bluesky -[bluesky](https://blueskyproject.io/)
\ No newline at end of file +[bluesky](https://blueskyproject.io/) + +Bluesky is a project made up of several other projects + +## ophyd + +## bluesky-ui + +# Instrbuilder + +integrates with ophyd / bluesky project. + +# Instrumental + +[website](https://instrumental-lib.readthedocs.io/) + +Quote: +Instrumental is a Python-based library for controlling lab hardware like cameras, DAQs, oscilloscopes, spectrometers, and more. It has high-level drivers for instruments from NI, Tektronix, Thorlabs, PCO, Photometrics, Burleigh, and others. + +# Lantz + +[website](https://lantz.readthedocs.io/) + +Simple yet powerful instrumentation in Python + +# PyCMDS + +(personal project) + +# PyDM + +[project webpage](http://slaclab.github.io/pydm/) + +Python display manager. +PyDM is a PyQt-based framework for building user interfaces for control systems. +The goal is to provide a no-code, drag-and-drop system to make simple screens, as well as a straightforward python framework to build complex applications. + +# python-microscopy + +[website](http://www.python-microscopy.org/) + +Quote: +python-microscopy is a large package including a farily mature microscope control GUI as well as a lot of functionality for analysis and postprocessing of microscopy data, especially for single molecule localization experiments. + +# Qudi + +[website](https://ulm-iqo.github.io/qudi-generated-docs/html-docs/index.html) + +?? + +# ScopeFoundry + +[website](http://www.scopefoundry.org/) + +Quote: +A Python platform for controlling custom laboratory experiments and visualizing scientific data. + +# storm-control + +[source](https://github.com/ZhuangLab/storm-control) + +Quote: +storm-control was originally designed for acquiring single molecule localization microscopy data in a manual or semi-automated fashion. +At a later point the ability to collect MERFISH data was added. + +# yaq + +(personal project) |