diff options
| -rw-r--r-- | abstract.tex | 2 | ||||
| -rw-r--r-- | active_correction/chapter.tex | 23 | ||||
| -rw-r--r-- | introduction/chapter.tex | 23 | 
3 files changed, 32 insertions, 16 deletions
| diff --git a/abstract.tex b/abstract.tex index 5ef1404..1a1060d 100644 --- a/abstract.tex +++ b/abstract.tex @@ -10,7 +10,7 @@ This approach has several unique capabilities:    \item resolving congested states \cite{ZhaoWei1999b, DonaldsonPaulMurray2008a}    \item extracting spectra that would otherwise be selection-rule disallowed      \cite{BoyleErinSelene2013b, BoyleErinSelene2014b}, -  \item resolving fully coherent dyanmics \cite{PakoulevAndreiV2009a},  +  \item resolving fully coherent dynamics \cite{PakoulevAndreiV2009a},     \item measuring coupling \cite{WrightJohnCurtis2011a}, and    \item resolving ultrafast dynamics.  % TODO: cite  \end{denumerate} diff --git a/active_correction/chapter.tex b/active_correction/chapter.tex index f4447d0..30919cd 100644 --- a/active_correction/chapter.tex +++ b/active_correction/chapter.tex @@ -84,9 +84,24 @@ For this reason, SDC for split OPAs is a multidimensional problem, which in prin  multi-dimensional acquisition to fully record.  %
  In practice, however, these corrections are recorded iteravely.  %
 -[ALTHOUGH ACTIVE, CAN SOMETIMES BE CORRECTED FOR IN POST: SEE WRIGHTTOOLS.OFFSET]
 -
 -[SDC IN CONTEXT OF WHITE LIGHT]
 +White light sources are also interesting to consider in the context of spectral delay
 +correction.  %
 +White light is typically quite chirped, with lower frequency (redder) colors traveling ahead of
 +high frequency (bluer) colors.  %
 +Typically, white light might serve as a ``probe'' that interacts last with the sample.  %
 +If a scanning monochromator is used, spectral delay correction could be employed such that each
 +color within the white light pulse arrives at the same delay.  %
 +If a fully coherent experiment is performed with chirped white light as one of the excitation
 +pulses, the other pulses will provide a gating effect in time that isolates interaction from one
 +frequency in the white pulse.  %
 +This is similar to the gating that is accomplished using ``delay 1'' in the TOPAS-C OPAs (see
 +section  ...).  %
 +By gating in this way, a \emph{frequency} axis along the white light dimension could be scanned
 +using a delay stage.  %
 +COLORS' has taken this idea to it's logical conclusion, with support for ``OPAs'' that are actually
 +controlled by delay stages, although the idea has not yet been realized in practice.  %
 +
 +[DESCRIPTION OF FIGURE]
  \begin{figure}
  	\includegraphics[width=0.45\textwidth]{"active_correction/sdc_before"}
 @@ -98,6 +113,8 @@ In practice, however, these corrections are recorded iteravely.  %  \section{Poynting correction}  % ==================================================================
 +[CONTENT FROM KYLE SUNDEN]
 +
  \begin{figure}
    \caption[CAPTION TODO]{
      CAPTION TODO: POYNTING CORRECTION FIGURE
 diff --git a/introduction/chapter.tex b/introduction/chapter.tex index 285bd14..4d1a566 100644 --- a/introduction/chapter.tex +++ b/introduction/chapter.tex @@ -101,13 +101,12 @@ WrightTools is made to be extended, so it will continue to evolve along with its  From an instrumental perspective, MR-CMDS is a problem of calibration and coordination.  % 
  Within the Wright Group, each of our two main instruments are composed of roughly ten actively
  moving component hardwares. %
 -Many of these components are purchased directly from vendors such as SpectraPhysics, National
 -Instruments, Horiba, Thorlabs, and Newport.  %
 -Others are created or heavily modified by graduate students.  %
 +Many of these components are purchased directly from commercial vendors, while others are created
 +or heavily modified by graduate students.  %
  The Wright Group has always maintained custom acquisition software packages which control the
  complex, many-stepped dance that these components must perform to acquire MR-CMDS spectra.  %
 -When I joined the Wright Group, I saw that acquisition software was a real barrier to experimental
 +When I joined the Wright Group, I saw that acquisition software was a barrier to experimental
  progress and flexibility.  %
  Graduate students had ideas for instrumental enhancements that were infeasible because of the
  challenge of incorporating the new components into the existing software ecosystem.  %
 @@ -126,7 +125,7 @@ This has enabled graduate students to add and remove hardware whenever necessary  about a heavy additional programming burden.  %
  PyCMDS is now used to drive both MR-CMDS instruments in the Group, allowing for easy sharing of
  component hardware and lessening the total amount of software that the Group needs to maintain.  %
 -Besides being more flexible, PyCMDS solves a number of other problems.  %
 +Besides being more flexible than prior software, PyCMDS solves a number of other problems.  %
  It offers fully automated strategies for calibrating component hardwares, making calibration less
  arduous and more reproducible.  %
  It offers more fine-grained control of data acquisition and timing, enabling more complex
 @@ -138,9 +137,8 @@ Like any analytical technique, MR-CMDS is subject to artifacts: features of the  caused by instrumental imperfections or limitations, and do not reflect the intrinsic material
  response that is of interest.  %
  % JCW: HOW THE EXPERIMENT WAS DONE, NOT WHAT IT IS HOPING TO MEASURE
 -For example, consider absorptive effects \cite{CarlsonRogerJohn1989a}, pulse effects
 -\cite{SpencerAustinP2015a}, and window contributions \cite{MurdochKiethM2000a}: all well-known
 -artifacts in CMDS.  %
 +For example, consider well-known artifacts such as absorptive effects \cite{CarlsonRogerJohn1989a},
 +pulse effects \cite{SpencerAustinP2015a}, and window contributions \cite{MurdochKiethM2000a}.  %
  Since MR-CMDS is a very active experiment, with many moving motors, an active approach to artifact
  correction is particularly appropriate.  %
  Chapter \ref{cha:act} describes strategies for implementing such corrections.  %
 @@ -149,7 +147,7 @@ at the same time.  %  Dual chopping can correct for scatter and other unwanted processes, ensuring that the observed
  signal depends on all of the excitation beams.  %
  Fibrillation can wash out interference between desired and undesired processes, and is
 -complementary with chopping.  %
 +complementary to chopping.  %
  Automated poynting correction and power correction can account for non-idealities in OPA
  performance.  %
 @@ -160,12 +158,13 @@ Resonant responses are impulsive, like a hammer hitting a bell.  %  The impulsive limit is particularly well suited for describing time domain experiments.  %
  In the driven limit, pulses are narrow in frequency and long in time compared to material
  response.  %
 -Resonant responses are driven, like a jello dessert sitting on a washing machine.  %
 +Resonant responses are driven, like a jiggling jello dessert sitting on a washing machine.  %
  The expected spectrum in both of these limits can be computed analytically.  %
  Things get more complicated in the mixed domain, where pulses have similar bandwidth as the
  material response. %
  Experiments in this domain are a practical necessity as CMDS addresses systems with very fast
 -dephasing times. \cite{SmallwoodChristopherL2016a, PerlikVaclav2017a}  %
 +dephasing times. \cite{SmallwoodChristopherL2016a, PerlikVaclav2017a}  % BJT: connect bw and
 +                                % dephasing
  At the same time, the marginal resolution in frequency \emph{and} time that the mixed domain
  possess promises huge potential in pathway resolution and decongestion.
  \cite{PakoulevAndreiV2009a}  %
 @@ -208,7 +207,7 @@ Despite challenges in software, hardware, and theory MR-CMDS is a crucial tool i  scientists.  %
  This dissertation describes several ways to make MR-CMDS more accessible through software and
  hardware development.  %
 -PyCMDS has made data collection faster and more artifact-free.  %
 +PyCMDS has enabled new experiments, and has made data collection faster and more artifact-free.  %
  WrightTools has trivialized data processing, tightening the loop between idea and execution.  %
  Theory can be used to guide experimental insight in the promising, if challenging, mixed domain.  %
  Applications of these ideas in three materials are presented.  %
 | 
