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authorBlaise Thompson <blaise@untzag.com>2018-05-09 16:52:28 -0500
committerBlaise Thompson <blaise@untzag.com>2018-05-09 16:52:28 -0500
commit2514e7edee8cd66f6bc2e966082168b9663f7450 (patch)
treec243c084bb3ba06c7f7a74fc5958619b89c9d89a /software
parentb6d88e014f454e040a96d6f1342cefff0c99f061 (diff)
2018-05-09 16:52
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@@ -87,7 +87,7 @@ Quoting Soergel:
More likely, it systematically alters every data point, or occurs in some downstream aggregate
step with effectively global consequences. %
In general, software errors produce outcomes that are inaccurate, not merely imprecise. %
-
+
\end{dquote}
On a more positive note, better software development practices may be ``low-hanging-fruit'' that
@@ -448,6 +448,11 @@ It can support arbitrary datatypes and is optimized to quickly process large and
datasets. %
In Python, HDF5 is supported primarily through the h5py package. \cite{h5py} %
+Many scientific disciplines have built custom file formats on top of the HDF5 standard. %
+These include biological imaging \cite{DoughertyMatthewT2009a}, scanning transmission X-ray
+microscopy \cite{WattsBenjamin2016a}, scalable nucleotide tallies \cite{PylPaulTheodor2014a}, and
+even ultrasonic concrete data \cite{PrinceLuke2017a}.
+
\section{Scientific Python} % --------------------------------------------------------------------
SciPy is a collection of \emph{``open-source software for mathematics, science, and egnineering.''}