diff options
| -rw-r--r-- | acquisition/chapter.tex | 121 | ||||
| -rw-r--r-- | acquisition/slack.png | bin | 0 -> 125786 bytes | |||
| -rw-r--r-- | acquisition/tune_test.png | bin | 0 -> 116437 bytes | |||
| -rw-r--r-- | bibliography.bib | 14 |
4 files changed, 126 insertions, 9 deletions
diff --git a/acquisition/chapter.tex b/acquisition/chapter.tex index 863bf96..832e698 100644 --- a/acquisition/chapter.tex +++ b/acquisition/chapter.tex @@ -1,7 +1,5 @@ \chapter{Acquistion} \label{cha:acq}
-% TODO: cool quote, if I can think of one
-
\begin{dquote}
The question of software correctness ultimately boils down to, “Does it do what we have in our
minds, even the things we have not gotten around to thinking about yet?”
@@ -259,7 +257,6 @@ from the global \python{Hardware} class shown in \autoref{aqn:lst:parent_hardwar \label{aqn:fig:hardware_class}
\end{figure}
-
\begin{figure}
\includebash{"acquisition/hardware_inheritance"}
\caption[Hardware inheritance.]{
@@ -267,40 +264,152 @@ from the global \python{Hardware} class shown in \autoref{aqn:lst:parent_hardwar \label{aqn:fig:hardware_inheritance}
\end{figure}
-
+So every hardware object must have the following...
\subsection{Delays} % ----------------------------------------------------------------------------
+Delays are the kind of thing that have a position in absolute units, a zero position, and a
+relative position measured in fs or ps. %
+They also are the kind of thing that is most commonly subject to offset by the Autonomic
+system... %
+
+In addition to the inherited methods, delay hardware objects require the following:
+\begin{ditemize}
+ \item \python{set_motor_position}
+\end{ditemize}
+
+Delay driver objects require the following:
+\begin{ditemize}
+ \item \python{set_motor_position}
+\end{ditemize}
+
+The delay GUI, by default, offers
+\begin{ditemize}
+ \item \python{on_home}
+ \item \python{on_set_motor}
+ \item \python{on_set_zero}
+\end{ditemize}
+
\subsection{Spectrometers} % ---------------------------------------------------------------------
+Spectrometers are the kind of thing that can be set to a single color (typically native units are
+in nm). %
+They often have turrets that allow for switching between gratings. %
+Other features are not currently supported as PyCMDS has only been asked to drive one kind of
+monochromator so far. %
+
+Hardware:
+
+Driver:
+
+GUI:
+
\subsection{OPAs} % ------------------------------------------------------------------------------
+Hardware:
+
+Driver:
+
+GUI:
+
+\subsubsection{Curves}
+
+Recursive
+
+United
+
+Interpolation
+
\subsection{Filters} % ---------------------------------------------------------------------------
+Hardware:
+
+Driver:
+
+GUI:
+
\section{Sensors (devices)} \label{aqn:sec:sensors} % ============================================
+Sensors are...
+
+For DAQ cards, shots and samples...
+
+Power of digital processing...
+
+% TODO: screenshots
+
\subsection{Sensors as axes} % -------------------------------------------------------------------
-\section{Autonomic} % ============================================================================
+% TODO: equation from Skye
+
+% TODO: poweramp tune test (see darien slack)
+
+\section{Autonomic} \label{aqn:sec:autonomic} % ==================================================
+
+\begin{dquote}
+ The autonomic nervous system, which innervates primarily the smooth musculature of all organs,
+ the heart and the glands, mediates the neuronal regulation of the internal milieu. %
+ The actions of this system, as its name implies, are in general not under direct voluntary
+ control. %
+ These characteristics distinguish the autonomic nervous system from the somatic nervous system,
+ which mediates afferent and efferent communication with the enviornment and, for the most part,
+ is subject to voluntary control and accessible to consciousness. %
+
+ The autonomic and somatic systems operate hand in hand...
+
+ The functions of the autnomic nervous system are to keep the internal milieu of the body constant
+ (homeostasis...) or adjust it as required by changing circumstances (e.g., mechanical work, food
+ intake, water deprivation, heat or cold). %
+
+ \dsignature{W. J\"{a}nig, Autonomic Nervous System (1989) \cite{JanigW1989a}}
+\end{dquote}
% TODO: concept of additive offsets
\section{Somatic} \label{aqn:sec:somatic} % =======================================================
+In contrast with the autonomic system (\autoref{aqn:sec:autonomic}), the somatic system is all
+about voluntary, user specified motion. %
+This is where the fun stuff happens---the acquisitions!
+
\subsection{Acquisition modules} % ---------------------------------------------------------------
-% TODO: the aqn file
+% TODO: the aqn file (show one!)
% TODO: list of modules, descriptions thereof
+\subsubsection{Scan}
+
+\subsubsection{AutoTune}
+
+\subsubsection{MotorTune}
+
+\subsubsection{PoyntingTune}
+
\subsection{Queue manager} % ---------------------------------------------------------------------
\subsection{The central loop of PyCMDS} % --------------------------------------------------------
\subsection{The data file} % ---------------------------------------------------------------------
+Does not have the same dimensionality restrictions as prior acquisition software. %
+
+Self describing (enabled by \python{tidy_headers}).
+
\subsection{Automatic processing} % --------------------------------------------------------------
+For scan module, just
+
+\section{Integrations} % =========================================================================
+
+\begin{figure}
+ \frame{\includegraphics[width=\textwidth]{"acquisition/slack"}}
+ \caption[TODO]{
+ TODO
+ }
+ \label{aqn:fig:slack}
+\end{figure}
+
\section{Future directions} % ====================================================================
\subsection{Spectral delay correction module} % --------------------------------------------------
diff --git a/acquisition/slack.png b/acquisition/slack.png Binary files differnew file mode 100644 index 0000000..91dd314 --- /dev/null +++ b/acquisition/slack.png diff --git a/acquisition/tune_test.png b/acquisition/tune_test.png Binary files differnew file mode 100644 index 0000000..cb00346 --- /dev/null +++ b/acquisition/tune_test.png diff --git a/bibliography.bib b/bibliography.bib index ee2d58f..61c7013 100644 --- a/bibliography.bib +++ b/bibliography.bib @@ -790,6 +790,16 @@ year = {1998} month = {may},
}
+@incollection{JanigW1989a,
+ author = {W. J\"{a}nig},
+ booktitle = {Human Physiology},
+ doi = {10.1007/978-3-642-73831-9_16},
+ pages = {333--370},
+ publisher = {Springer Berlin Heidelberg},
+ title = {Autonomic Nervous System},
+ year = 1989,
+}
+
@article{JoffreM1988a,
author = {Joffre, M and la Guillaume, C. Benoit {\`{a}} and Peyghambarian, N and Lindberg,
M and Hulin, D and Migus, A and Koch, S W and Antonetti, A},
@@ -1874,6 +1884,7 @@ year = {1998} month = {sep},
}
+
@article{ZhaoWei1999b,
author = {Zhao, Wei and Wright, John C.},
title = {{Spectral Simplification in Vibrational Spectroscopy Using Doubly Vibrationally
@@ -1888,7 +1899,6 @@ year = {1998} month = {dec},
}
-
@article{ZhaoWei2000a,
author = {Zhao, Wei and Urdoch, Keith M M and Besemann, Daniel M and Condon, Nicholas J.
and Meyer, Kent a. and Right, John C W},
@@ -1919,8 +1929,6 @@ year = {1998} url = {http://docs.h5py.org/en/latest/high/group.html#groups},
}
-
-
@misc{pyqtgraph,
note = {Accessed: 2018-03-27},
title = {PyQtGraph: Scientific Graphics and GUI Library for Python},
|
