From 56d04b4b2fdf18292ebeb4de44dae4cd1f2d78af Mon Sep 17 00:00:00 2001 From: Blaise Thompson Date: Fri, 14 Apr 2023 10:46:42 -0500 Subject: update cv with yaq paper --- public/ThompsonBlaiseCV.pdf | Bin 111881 -> 130332 bytes public/ThompsonBlaiseCV.tex | 142 ++++++++++++++++++++++++-------------------- public/index.html | 25 +++++++- 3 files changed, 99 insertions(+), 68 deletions(-) diff --git a/public/ThompsonBlaiseCV.pdf b/public/ThompsonBlaiseCV.pdf index cfad5b0..9bf9e4d 100644 Binary files a/public/ThompsonBlaiseCV.pdf and b/public/ThompsonBlaiseCV.pdf differ diff --git a/public/ThompsonBlaiseCV.tex b/public/ThompsonBlaiseCV.tex index 1c1fc87..1d04387 100644 --- a/public/ThompsonBlaiseCV.tex +++ b/public/ThompsonBlaiseCV.tex @@ -37,7 +37,7 @@ {John C. Wright Group - ultrafast materials spectroscopy}{Madison WI} \item Dissertation: \emph{Development of Frequency Domain Multidimensional Spectroscopy with \\ Applications in Semiconductor Photophysics} - [\href{https://drive.google.com/open?id=1Ik2aaVaT-60R2KSATaFOlG5qDiR_xRze}{PDF}] + [\href{https://doi.org/10.5281/zenodo.7627321}{doi:10.5281/zenodo.7627321}] \item Designed and constructed software tools to collect and process multidimensional spectra. \item Designed and constructed optomechanical and electronic hardware. \item Maintained and conducted experiments on a custom ultrafast laser system. @@ -63,89 +63,99 @@ \begin{rSection}{Publications \MakeLowercase{(see \href{http://cv.blaise.zone/\#publications}{my online CV} for more context)}} \begin{etaremune}[leftmargin = 1.75em] - \item - Kregel, S. J.; \textbf{Thompson, B. J.}; Nathanson, G. M.; \& Betram, T. H. + \vfill \item + The yaq project: Standardized software enabling flexible instrumentation \\ + Sunden, K. F.; Kohler, D. K.; Meyer, K. A.; Cruz Parrilla, P. L.; Wright, J. C.; \& \underline{Thompson, B. J.} + (2023) + \textit{Review of Scientific Instruments}. + \href{https://doi.org/10.1063/5.0135255}{doi:10.1063/5.0135255} + \vfill \item + The Wisconsin Oscillator: A Low-Cost Circuit for Powering Ion Guides, Funnels, and Traps \\ + Kregel, S. J.; \underline{Thompson, B. J.}; Nathanson, G. M.; \& Betram, T. H. \\ (2021) - The Wisconsin Oscillator: A Low-Cost Circuit for Powering Ion Guides, Funnels, and Traps - \textit{Organic Letters}. + \textit{Journal of the American Society for Mass Spectrometry}. \href{https://doi.org/10.1021/jasms.1c00247}{doi:10.1021/jasms.1c00247} - \item - Lampkin, P. P.; \textbf{Thompson, B. J.}; \& Gellman, S. H. + \vfill \item + Versatile Open-Source Photoreactor Architecture for Photocatalysis Across the Visible Spectrum \\ + Lampkin, P. P.; \underline{Thompson, B. J.}; \& Gellman, S. H. \\ (2021) - Versatile Open-Source Photoreactor Architecture for Photocatalysis Across the Visible Spectrum. - \textit{Organic Letters}, 23, 13, 5277–5281. + \textit{Organic Letters}. \href{https://doi.org/10.1021/acs.orglett.1c01910}{doi:10.1021/acs.orglett.1c01910} - \item - Salazar, C.; \textbf{Thompson, B. J.}; Knapp, S.; Myers, S. \& Stahl, S. S. + \vfill \item + Multichannel gas-uptake/evolution reactor for monitoring liquid-phase chemical reactions. \\ + Salazar, C.; \underline{Thompson, B. J.}; Knapp, S.; Myers, S. \& Stahl, S. S. \\ (2021) - Multichannel gas-uptake/evolution reactor for monitoring liquid-phase chemical reactions. \textit{Review of Scientific Instruments}, 92:044103. \href{https://doi.org/10.1063/5.0043007}{doi:10.1063/5.0043007} - \item - Ravindran, P.; \textbf{Thompson, B. J.}; Soares, R. K. \& Wiedenhoeft, A. C. + \vfill \item + The XyloTron: Flexible, Open-Source, Image-Based Macroscopic Field Identification of Wood Products. \\ + Ravindran, P.; \underline{Thompson, B. J.}; Soares, R. K. \& Wiedenhoeft, A. C. \\ (2020) - The XyloTron: Flexible, Open-Source, Image-Based Macroscopic Field Identification of Wood Products. - \textit{Frontiers in Plant Science}, 11:1015. \\ - \href{https://doi.org/10.3389/fpls.2020.01015}{doi:10.3389/fpls.2020.01015} - \item \textbf{Thompson, B. J.}; Sunden, K. F.; Morrow, D. K.; Neff-Mallon, N. A. \& Wright, J. C. + \textit{Frontiers in Plant Science}. \href{https://doi.org/10.3389/fpls.2020.01015}{doi:10.3389/fpls.2020.01015} + \vfill \item + WrightTools: a Python package for multidimensional spectroscopy. \\ + \underline{Thompson, B. J.}; Sunden, K. F.; Morrow, D. K.; Neff-Mallon, N. A. \& Wright, J. C. \\ (2019) - WrightTools: a Python package for multidimensional spectroscopy. - \textit{The Journal of Open Source Software}, 4(33), 1141. \\ - \href{https://doi.org/10.21105/joss.01141}{doi:10.21105/joss.01141} - \item Handali, J. D.; Neff-Mallon, N.; Sunden, K. F.; \textbf{Thompson, B. J.}; Brunold, T. C - \& Wright, J. C. + \textit{The Journal of Open Source Software}. \href{https://doi.org/10.21105/joss.01141}{doi:10.21105/joss.01141} + \vfill \item + Mixed vibrational-electronic Coherent Multidimensional Spectroscopy \\ + Reveals the Electronic Structure of Co(III)balamins Cyanocobalamin and detuerated Aquacobalamin. \\ + Handali, J. D.; Neff-Mallon, N.; Sunden, K. F.; \underline{Thompson, B. J.}; Brunold, T. C \& Wright, J. C. \\ (2018) - Mixed vibrational-electronic Coherent Multidimensional Spectroscopy Reveals the Electronic - Structure of Co(III)balamins Cyanocobalamin and detuerated Aquacobalamin. - \textit{The Journal of Physical Chemistry A} 122 (46), pp 9031–9042. - \href{https://doi.org/10.1021/acs.jpca.8b07678}{doi:10.1021/acs.jpca.8b07678} - \item Kohler, D. D., \textbf{Thompson, B. J.} \& Wright, J. C. + \textit{The Journal of Physical Chemistry A}. \href{https://doi.org/10.1021/acs.jpca.8b07678}{doi:10.1021/acs.jpca.8b07678} + \vfill \item + Resonant Third-Order Susceptibility of PbSe Quantum Dots \\ + Determined by Standard Dilution and Transient Grating Spectroscopy. \\ + Kohler, D. D., \underline{Thompson, B. J.} \& Wright, J. C. \\ (2018) - Resonant Third-Order Susceptibility of PbSe Quantum Dots Determined by Standard Dilution - and Transient Grating Spectroscopy. - \textit{The Journal of Physical Chemistry C}, 122 (31), 18086–18093. + \textit{The Journal of Physical Chemistry C}. \href{http://doi.org/10.1021/acs.jpcc.8b04462}{doi:10.1021/acs.jpcc.8b04462} - \href{https://doi.org/10.17605/OSF.IO/3VPRB}{osf.io/3vprb}. - \item Sunden, K. F., \textbf{Thompson, B. J.} \& Wright, J. C. + \vfill \clearpage \vfill \item + WrightSim: Using PyCUDA to Simulate Multidimensional Spectra \\ + Sunden, K. F., \underline{Thompson, B. J.} \& Wright, J. C. \\ (2018) - WrightSim: Using PyCUDA to Simulate Multidimensional Spectra - \textit{Proceedings of the 17th Python in Science Conference} + \textit{Proceedings of the 17th Python in Science Conference}. \href{https://doi.org/10.25080/Majora-4af1f417-00c}{doi:10.25080/Majora-4af1f417-00c} - \item Horak, E. H.; Rea, M. T.; Heylman, K. D.; Gelbwaser-Klimovsky, D.; Saikin, S. K.; - \textbf{Thompson, B. J.}; Kohler, D. D.; Knapper, K. A.; Wei, W.; Pan, F.; Gopalan, P.; - Wright, J. C.; Aspuru-Guzik, A. \& Goldsmith, Randall H. + \vfill \item + Exploring Electronic Structure and Order in Polymers via Single-Particle Microresonator Spectroscopy. \\ + Horak, E. H.; Rea, M. T.; Heylman, K. D.; Gelbwaser-Klimovsky, D.; \\ + Saikin, S. K.; \underline{Thompson, B. J.}; Kohler, D. D.; Knapper, K. A.; Wei, W.; Pan, F.; \\ + Gopalan, P.; Wright, J. C.; Aspuru-Guzik, A. \& Goldsmith, Randall H. \\ (2018) - Exploring Electronic Structure and Order in Polymers via Single-Particle Microresonator - Spectroscopy. \textit{Nano Letters} \href{https://doi.org/10.1021/acs.nanolett.7b04211}{doi:10.1021/acs.nanolett.7b04211} - \item Kohler, D. D.; \textbf{Thompson, B. J.} \& Wright, J. C. + \vfill \item + Frequency-domain coherent multidimensional spectroscopy when dephasing rivals pulsewidth: \\ + Disentangling material and instrument response. \\ + Kohler, D. D.; \underline{Thompson, B. J.} \& Wright, J. C. \\ (2017) - Frequency-domain coherent multidimensional spectroscopy when dephasing rivals pulsewidth: - Disentangling material and instrument response. - \textit{The Journal of Chemical Physics}, 147(8), 84202. + \textit{The Journal of Chemical Physics}. \href{https://doi.org/10.1063/1.4986069}{doi:10.1063/1.4986069} - \item Czech, K. J.; \textbf{Thompson, B. J.}; Kain, S.; Ding, Q.; Shearer, M. J.; Hamers, - R. J.; Jin, S. \& Wright, J. C. + \vfill \item + Measurement of Ultrafast Excitonic Dynamics of Few-Layer MoS$_2$ \\ + Using State-Selective Coherent Multidimensional Spectroscopy. \\ + Czech, K. J.; \underline{Thompson, B. J.}; Kain, S.; Ding, Q.; Shearer, M. J.; \\ + Hamers, R. J.; Jin, S. \& Wright, J. C. \\ (2015) - Measurement of Ultrafast Excitonic Dynamics of Few-Layer MoS$_2$ Using State-Selective - Coherent Multidimensional Spectroscopy. - \textit{ACS Nano}, 9(12), 12146–12157. + \textit{ACS Nano}. \href{https://doi.org/10.1021/acsnano.5b05198}{doi:10.1021/acsnano.5b05198} - \item Fu, Y.; Meng, F.; Rowley, M. B.; \textbf{Thompson, B. J.}; Shearer, M. J.; - Ma, D.; Hamers, R. J.; Wright J. C. \& Jin, S. + \vfill \item + Solution Growth of Single Crystal Methylammonium Lead Halide Perovskite Nanostructures \\ + for Optoelectronic and Photovoltaic Applications. \\ + Fu, Y.; Meng, F.; Rowley, M. B.; \underline{Thompson, B. J.}; Shearer, M. J.; Ma, D.; \\ + Hamers, R. J.; Wright J. C. \& Jin, S. \\ (2015) - Solution Growth of Single Crystal Methylammonium Lead Halide Perovskite Nanostructures for - Optoelectronic and Photovoltaic Applications. - \textit{Journal of the American Chemical Society}, 137(17), 5810–5818. + \textit{Journal of the American Chemical Society}. \href{https://doi.org/10.1021/jacs.5b02651}{doi:10.1021/jacs.5b02651} - \item Cabán-Acevedo, M.; Kaiser, N. S.; English, C. R.; Liang, D.; \textbf{Thompson, B. J.}; - Chen, H.-E.; Czech, K. C.; Wright, J. C.; Hamers, R. J. \& Jin, S. + \vfill \item + Ionization of High-Density Deep Donor Defect States Explains \\ + the Low Photovoltage of Iron Pyrite Single Crystals. \\ + Cabán-Acevedo, M.; Kaiser, N. S.; English, C. R.; Liang, D.; \underline{Thompson, B. J.}; \\ + Chen, H.-E.; Czech, K. C.; Wright, J. C.; Hamers, R. J. \& Jin, S. \\ (2014) - Ionization of High-Density Deep Donor Defect States Explains the Low - Photovoltage of Iron Pyrite Single Crystals. - \textit{Journal of the American Chemical Society}, 136(49), 17163–17179. + \textit{Journal of the American Chemical Society}. \href{https://doi.org/10.1021/ja509142w}{doi:10.1021/ja509142w} \\ + \vfill \end{etaremune} \end{rSection} @@ -153,34 +163,34 @@ \begin{rSection}{Presentations} \begin{etaremune}[leftmargin = 1.75 em] - \item \textit{Invited Speaker:} \textbf{Thompson, B. J.} + \item \textit{Invited Speaker:} \underline{Thompson, B. J.} Scientific Software Development: A Pragmatic Approach (2020) \textit{University of Colorado Boulder Department of Chemistry.} Boulder, CO USA [\href{http://cv.blaise.zone/boulder-2020-05-07.pdf}{PDF}] - \item \textit{Presentation:} \textbf{Thompson, B. J.} + \item \textit{Presentation:} \underline{Thompson, B. J.} Nonlinear Multidimensional Spectroscopy. (2017) \textit{Chaos and Complexity Seminar.} Madison, WI USA [\href{http://cv.blaise.zone/chaos-2017-11-07.pdf}{PDF}] \item \textit{Poster:} - \textbf{Thompson, B. J.} + \underline{Thompson, B. J.} A Robust, Fully Automated Algorithm to Collect High Quality OPA Tuning Curves. (2016) \textit{CMDS 2016.} Groningen, the Netherlands [\href{https://drive.google.com/open?id=1hKj5MW_ms2d92Zj-Q06PTVIVBvIqfN3C}{PDF}] \item \textit{Poster:} - \textbf{Thompson, B. J.} + \underline{Thompson, B. J.} Utilizing Coherent Multidimensional Spectroscopy to Investigate Nanomaterials for Solar Energy Generation. (2012) \textit{Midwest Universities Analytical Chemistry Conference'}. Madison, WI USA \item \textit{Poster:} - \textbf{Thompson, B. J.} + \underline{Thompson, B. J.} Spectroscpic Investigation of Plasmonic Nanoparticles. (2011) \textit{Bates College Mount David Summit.} @@ -220,8 +230,8 @@ \clearpage \begin{rSection}{Teaching Experience} - \begin{rSubsection}{Graduate Chemical Instrumentation: Design \& Control (Electronics)}{2017, 2019 - 2022} - {5 semesters}{UW-Madison} + \begin{rSubsection}{Graduate Chemical Instrumentation: Design \& Control (Electronics)}{2017, 2019 - 2023} + {6 semesters}{UW-Madison} \item Led laboratory section of course. \item Introduced graduate students to basic electronics skills such as bread-boarding, oscilloscope usage, \\ component choice and enclosure design and construction. diff --git a/public/index.html b/public/index.html index 81b7a62..22049f5 100644 --- a/public/index.html +++ b/public/index.html @@ -83,7 +83,7 @@ Thanks for stopping by! —Blaise
  • Contributed to general-purpose multidimensional spectra modeling software.
  • Taught fellow students how to use instruments.
    • -For more information, see my dissertation: Development of Frequency Domain Multidimensional Spectroscopy with Applications in Semiconductor Photophysics +For more information, see my dissertation: Development of Frequency Domain Multidimensional Spectroscopy with Applications in Semiconductor Photophysics

    Undergraduate Researcher (Plasmonics) @@ -121,7 +121,28 @@ For more information, see my thesis: The Wisconsin Oscillator: A Low-Cost Circuit for Powering Ion Guides, Funnels, and Traps

    +

    The yaq project: Standardized software enabling flexible instrumentation

    + + Sunden, K. F.; + Kohler, D. K.; + Meyer, K. A.; + Cruz Parrilla, P. L.; + Wright, J. C.; + and + Thompson, B. J. +
    +Review of Scientific Instruments (2023) +
      +
    • Invented a new, standardized way of communicating with hardware peripherals.
      • +
    • Software is highly modular, configurable.
      • +
    • Used by multiple research groups from different fields.
      • +
    • Collaborated with others around the world to "build bridges" between adjacent software projects.
      • +
    • Project continues to grow after publication, with documentation at yaq.fyi.
      • +
    + + +
  • +

    The Wisconsin Oscillator: A Low-Cost Circuit for Powering Ion Guides, Funnels, and Traps

    Kregel, S. J.; Thompson, B. J.; -- cgit v1.2.3