From ed54e24676bf010b643f6e44d776dc11ac36913a Mon Sep 17 00:00:00 2001
From: Blaise Thompson <blaise@untzag.com>
Date: Fri, 20 Apr 2018 08:08:57 -0500
Subject: 2018-04-20 08:08

---
 presentation.tex | 97 ++++++++++++++++++++++++++++++++++++++++++--------------
 1 file changed, 73 insertions(+), 24 deletions(-)

(limited to 'presentation.tex')

diff --git a/presentation.tex b/presentation.tex
index 1917763..97bd9de 100644
--- a/presentation.tex
+++ b/presentation.tex
@@ -1,7 +1,6 @@
 \documentclass{presentation}
 
-\title{Development of \\ Frequency Domain Multidimensional Spectroscopy \\
-  with Applications in Semiconductor Photophysics}
+\title{Development of \\ Frequency Domain Multidimensional Spectroscopy}
 \author{Blaise Thompson}
 
 \institute{University of Wisconsin--Madison}
@@ -14,8 +13,9 @@
 \section{CMDS}  % =================================================================================
 
 \begin{frame}{CMDS}
-	The Wright Group focuses on the development and usage of coherent multidimensional spectroscopy
-  (CMDS).
+	The Wright Group focuses on the development and usage of \\
+  Coherent MultiDimensional Spectroscopy (CMDS).
+  \vspace{\baselineskip} \\
   CMDS is a family of related nonlinear spectroscopic experiments.
 \end{frame}
    
@@ -29,16 +29,33 @@
 \end{frame}
 
 \begin{frame}{Analytical}
-  But wait! I'm an \emph{Analytical} Chemist?!
-  \\
-  The dream of the Wright Group (if not the current reality)
-  [REASONS FOR ANALYTICAL CHEMISTRY TO BE INTERESTED IN CMDS]
+  But wait! I'm an \emph{Analytical} Chemist...
+  \vspace{\baselineskip} \\
+  What am I doing in a field so rich with fundamental studies?
+  \vspace{\baselineskip} \\
+  I hope to convince you that CMDS can be used for analytical work.  % TODO: better
 \end{frame}
 
+% TODO: in fact, 2DIR is already used regularly...
+
 \begin{frame}{Analytical}  
   \fbox{\adjincludegraphics[width=\textwidth]{literature/PakoulevAndreiV2009a}}
 \end{frame}
 
+% TODO: pakoulev quotes
+
+\begin{frame}{Proteomics}
+  \fbox{\adjincludegraphics[width=\textwidth]{literature/FournierFrederic2009a}}
+\end{frame}
+
+% TODO: fournier quotes
+
+\begin{frame}{Proteomics}
+  \fbox{\adjincludegraphics[width=\textwidth]{literature/DonaldsonPaulMurray2010a}}
+\end{frame}
+
+% TODO: donaldson quotes
+  
 \section{Frequency domain}  % =====================================================================
 
 \begin{frame}{Domains of CMDS}
@@ -50,27 +67,43 @@
 \end{frame}
 
 \begin{frame}{Time domain}
-  [DESCRIPTION OF TIME DOMAIN]
+  Multiple broadband pulses are scanned in \emph{time} to collect a multidimensional interferogram.
+  \vspace{\baselineskip} \\
+  A local oscillator must be used to measure the \emph{phase} of the output.
+  \vspace{\baselineskip} \\
+  This technique is...
+  \begin{itemize}
+    \item fast (even single shot)
+    \item robust
+  \end{itemize}
+  pulse shapers have made time-domain CMDS (2DIR) almost routine.
 \end{frame}
 
 \begin{frame}{Frequency domain}
-  [DESCRIPTION OF FREQUENCY DOMAIN]
-\end{frame}
-
-\begin{frame}{Domains of CMDS}
-  Most experiments are collected in the time domain
+  In the Wright Group, we focus on \emph{frequency} domain ``Multi-Resonant'' (MR)-CMDS.
+  \vspace{\baselineskip} \\
+  Automated Optical Parametric Amplifiers (OPAs) are used to produce relatively narrow-band pulses.
+  Multidimensional spectra are collected ``directly'' by scanning OPAs against each-other.
+  \vspace{\baselineskip} \\
+  This strategy is...
   \begin{itemize}
-    \item fast
-    \item robust
+    \item slow (must directly visit each pixel)
+    \item fragile (many crucial moving pieces)
   \end{itemize}
-  So... why frequency domain?  
+  but! It is incredibly flexible.  
 \end{frame}
 
 \begin{frame}{Bandwidth}
+  MR-CMDS has no bandwidth limit!
+  \vspace{\baselineskip} \\
+  There is just the small matter of making the source continuously tunable...
   \adjincludegraphics[width=\textwidth]{opa/OPA_ranges}
 \end{frame}
 
 \begin{frame}{Selection rules}
+  MR-CMDS can easily collect data without an external local oscillator.
+  \vspace{\baselineskip} \\
+  This means... [BOYLE]
 \end{frame}
 
 \section{The instrument}  % =======================================================================
@@ -92,8 +125,10 @@
 \end{frame}
 
 \begin{frame}{Pipeline}
+  \adjincludegraphics[width=0.5\textwidth]{presentation/pipe}
   What does the ``pipeline'' of MR-CMDS data acquisition and processing look like in the Wright
-  Group? \\
+  Group?
+  \vspace{\baselineskip} \\
   How to increase data throughput and quality, while decreasing frustration of experimentalists?  %
 \end{frame}
 
@@ -101,18 +136,32 @@
 
 \begin{frame}{Processing}
   WrightTools.
-  \\
-  Universal file format.
-  \\
-  A unique, flexible multidimensional data model.
+\end{frame}
+
+\begin{frame}{Universal format}
+\end{frame}
+
+\begin{frame}{Flexible data model}
 \end{frame}
 
 \section{Acquisition}  % ==========================================================================
 
 \begin{frame}{Acquisition}
   PyCMDS.
-  \\
-  Modular software.
+\end{frame}
+
+\begin{frame}{Modular hardware model}
+\end{frame}
+
+\begin{frame}{Acquisitions}
+\end{frame}
+
+\begin{frame}{Queue}
+  This strategy can be incredibly productive!
+  \begin{itemize}
+    \item Soon after the queue was first implemented, we collected more pixels in two weeks than
+      had been collected over the previous three years.
+  \end{itemize}
 \end{frame}
 
 \section{Tuning}  % ===============================================================================
-- 
cgit v1.2.3

